BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A11SP1|AL430647
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1537 1877 0.0
>3x_Contig1537
Length = 10796
Score = 1877 bits (947), Expect = 0.0
Identities = 961/963 (99%), Gaps = 2/963 (0%)
Strand = Plus / Plus
Query: 1 atcaggttttagctcaacgacgaattaatgccctaagtttggtaaaaggcattattacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 atcaggttttagctcaacgacgaattaatgccctaagtttggtaaaaggcattattacga 1703
Query: 61 aagttccaacatatggagctgcccataaactgaaaagtatccgagcaggatacaatactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 aagttccaacatatggagctgcccataaactgaaaagtatccgagcaggatacaatactt 1763
Query: 121 taacaatggcgtatgcaagagccccagatacaactaatctatctctatcccagccattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 taacaatggcgtatgcaagagccccagatacaactaatctatctctatcccagccattat 1823
Query: 181 cgtaatctccaattaatttacctatactttcaccacatttgttcaacaaatccttgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 cgtaatctccaattaatttacctatactttcaccacatttgttcaacaaatccttgaaat 1883
Query: 241 atactggcatctcatattggtcagacagatctaagttataaagcagtccccatagagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 atactggcatctcatattggtcagacagatctaagttataaagcagtccccatagagcaa 1943
Query: 301 acaaaggaacgatagcagtaatttcgtgaaggattaagaatgatgtcattgtagaaacgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 acaaaggaacgatagcagtaatttcgtgaaggattaagaatgatgtcattgtagaaacgg 2003
Query: 361 cgccggcttcagaaagtttatcgaaataatgtttgtaacgaggattaccgttcaatcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 cgccggcttcagaaagtttatcgaaataatgtttgtaacgaggattaccgttcaatcttg 2063
Query: 421 tcaggaatttggactttttgatcagccgatgcagcctatcatcaattttcgatggttcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 tcaggaatttggactttttgatcagccgatgcagcctatcatcaattttcgatggttcga 2123
Query: 481 ccttgctcgagttataccgtatcccattgataaataatttcgccgggcctctcttttgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 ccttgctcgagttataccgtatcccattgataaataatttcgccgggcctctcttttgga 2183
Query: 541 ttatcgagtacctattaccgattaccattttggaacagctagtgccaagccctggcaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 ttatcgagtacctattaccgattaccattttggaacagctagtgccaagccctggcaatg 2243
Query: 601 attgcagtaatttcatatttctgtgtgttggagtatgtgtatgtctacaacaagtacagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 attgcagtaatttcatatttctgtgtgttggagtatgtgtatgtctacaacaagtacagc 2303
Query: 661 gagcccttcggagatcaaacaaaatattatatagcagtgattacgccactatgatgtcta 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 gag-ccttcggagatcaaacaaaatattatatagcagtgattacgccactatgatgtcta 2362
Query: 721 acagtcgttgaattaatttatggtgtgatatctttatcgtattgataaaccttcgcatgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2363 acagtcgttgaattaatttatggtgtgatatctttatcgtattgataaaccttcgcatgt 2422
Query: 781 ctatgttcatgcctgttgttaaaaagaatactatttacaagtgatttatgtgaaggtcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2423 ctatgttcatgcctgttgttaaaaagaatactatttacaagtgatttatgtgaaggtcat 2482
Query: 841 gtgatcataatgcattaataacttcctcgcaacgattgcacagagtgtcctcacttgggg 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2483 gtgatcataatgcattaataacttcctcgcaacgattgcacagagtgtcctcactt-ggg 2541
Query: 901 gagttatgcttccagcatctaggacatttatcagacgtactttcttctagcagtaactgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2542 gagttatgcttccagcatctaggacatttatcagacgtactttcttctagcagtaactgg 2601
Query: 961 atg 963
|||
Sbjct: 2602 atg 2604
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6510
Number of Sequences: 1807
Number of extensions: 6510
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)